Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YBL039W-BYBL039W-B 180 nt3.11□□□□□ -1.91
RAD3P06839 YBR089WYBR089W 600 nt3.11□□□□□ -1.91
RAD3P06839 CAF120YNL278W 3183 nt3.1□□□□□ -1.91
RAD3P06839 CEP3YMR168C 1827 nt3.1□□□□□ -1.91
RAD3P06839 FLO11YIR019C 4104 nt3.1□□□□□ -1.91
RAD3P06839 YDR340WYDR340W 303 nt3.1□□□□□ -1.91
RAD3P06839 RPL1BYGL135W 654 nt3.1□□□□□ -1.91
RAD3P06839 YGR107WYGR107W 450 nt3.1□□□□□ -1.91
RAD3P06839 YGR204C-AYGR204C-A 114 nt3.1□□□□□ -1.91
RAD3P06839 QCR10YHR001W-A 234 nt3.1□□□□□ -1.91
RAD3P06839 RPL27AYHR010W 411 nt3.1□□□□□ -1.91
RAD3P06839 RPS12YOR369C 432 nt3.1□□□□□ -1.91
RAD3P06839 RPL1AYPL220W 654 nt3.1□□□□□ -1.91
RAD3P06839 YPR203WYPR203W 309 nt3.1□□□□□ -1.91
RAD3P06839 RGC1YPR115W 3252 nt3.1□□□□□ -1.91
RAD3P06839 SEC15YGL233W 2733 nt3.1□□□□□ -1.91
RAD3P06839 PAM1YDR251W 2493 nt3.1□□□□□ -1.91
RAD3P06839 YGL101WYGL101W 648 nt3.09□□□□□ -1.91
RAD3P06839 THP2YHR167W 786 nt3.09□□□□□ -1.91
RAD3P06839 RPL15AYLR029C 615 nt3.09□□□□□ -1.91
RAD3P06839 RAD10YML095C 633 nt3.09□□□□□ -1.91
RAD3P06839 TAF4YMR005W 1167 nt3.09□□□□□ -1.91
RAD3P06839 SPC24YMR117C 642 nt3.09□□□□□ -1.91
RAD3P06839 MRPS17YMR188C 714 nt3.09□□□□□ -1.91
RAD3P06839 RUF5-1RUF5-1 710 nt3.09□□□□□ -1.91
RAD3P06839 RUF5-2RUF5-2 710 nt3.09□□□□□ -1.91
RAD3P06839 YBL094CYBL094C 333 nt3.09□□□□□ -1.91
RAD3P06839 LCL1YPL056C 306 nt3.09□□□□□ -1.91
RAD3P06839 ABD1YBR236C 1311 nt3.09□□□□□ -1.91
RAD3P06839 DYN1YKR054C 12279 nt3.09□□□□□ -1.92
RAD3P06839 YGR237CYGR237C 2358 nt3.09□□□□□ -1.92
RAD3P06839 RSE1YML049C 4086 nt3.09□□□□□ -1.92
RAD3P06839 YDR355CYDR355C 303 nt3.08□□□□□ -1.92
RAD3P06839 SPT2YER161C 1002 nt3.08□□□□□ -1.92
RAD3P06839 IME1YJR094C 1083 nt3.08□□□□□ -1.92
RAD3P06839 YJR128WYJR128W 360 nt3.08□□□□□ -1.92
RAD3P06839 REX3YLR107W 1215 nt3.08□□□□□ -1.92
RAD3P06839 YLR416CYLR416C 399 nt3.08□□□□□ -1.92
RAD3P06839 YLR444CYLR444C 303 nt3.08□□□□□ -1.92
RAD3P06839 PNT1YOR266W 1272 nt3.08□□□□□ -1.92
RAD3P06839 MRPL37YBR268W 318 nt3.08□□□□□ -1.92
RAD3P06839 EPL1YFL024C 2499 nt3.08□□□□□ -1.92
RAD3P06839 CHS3YBR023C 3498 nt3.07□□□□□ -1.92
RAD3P06839 EBS1YDR206W 2655 nt3.07□□□□□ -1.92
RAD3P06839 LCB4YOR171C 1875 nt3.07□□□□□ -1.92
RAD3P06839 FRE2YKL220C 2136 nt3.07□□□□□ -1.92
RAD3P06839 IRC6YFR043C 714 nt3.07□□□□□ -1.92
RAD3P06839 YKL033W-AYKL033W-A 711 nt3.07□□□□□ -1.92
RAD3P06839 USB1YLR132C 873 nt3.07□□□□□ -1.92
RAD3P06839 COQ9YLR201C 783 nt3.07□□□□□ -1.92
RAD3P06839 YOR263CYOR263C 408 nt3.07□□□□□ -1.92
RAD3P06839 CAF20YOR276W 486 nt3.07□□□□□ -1.92
RAD3P06839 COM2YER130C 1332 nt3.07□□□□□ -1.92
RAD3P06839 MIP6YHR015W 1980 nt3.07□□□□□ -1.92
RAD3P06839 STE23YLR389C 3084 nt3.06□□□□□ -1.92
RAD3P06839 PPH3YDR075W 927 nt3.06□□□□□ -1.92
RAD3P06839 BMH2YDR099W 822 nt3.06□□□□□ -1.92
RAD3P06839 YDR209CYDR209C 414 nt3.06□□□□□ -1.92
RAD3P06839 VAC8YEL013W 1737 nt3.06□□□□□ -1.92
RAD3P06839 NDC80YIL144W 2076 nt3.06□□□□□ -1.92
RAD3P06839 SDH3YKL141W 597 nt3.06□□□□□ -1.92
RAD3P06839 HHF1YBR009C 312 nt3.06□□□□□ -1.92
RAD3P06839 YPL071CYPL071C 471 nt3.06□□□□□ -1.92
RAD3P06839 TEC1YBR083W 1461 nt3.06□□□□□ -1.92
RAD3P06839 PHO81YGR233C 3537 nt3.06□□□□□ -1.92
RAD3P06839 VBA4YDR119W 2307 nt3.05□□□□□ -1.92
RAD3P06839 XRN1YGL173C 4587 nt3.05□□□□□ -1.92
RAD3P06839 NSA1YGL111W 1392 nt3.05□□□□□ -1.92
RAD3P06839 TRM12YML005W 1389 nt3.05□□□□□ -1.92
RAD3P06839 NSE3YDR288W 912 nt3.05□□□□□ -1.92
RAD3P06839 MCM21YDR318W 1107 nt3.05□□□□□ -1.92
RAD3P06839 YAR075WYAR075W 474 nt3.05□□□□□ -1.92
RAD3P06839 YMR141CYMR141C 309 nt3.05□□□□□ -1.92
RAD3P06839 TUM1YOR251C 915 nt3.05□□□□□ -1.92
RAD3P06839 ECM21YBL101C 3354 nt3.05□□□□□ -1.92
RAD3P06839 FAA2YER015W 2235 nt3.05□□□□□ -1.92
RAD3P06839 ITC1YGL133W 3795 nt3.04□□□□□ -1.92
RAD3P06839 KRE2YDR483W 1329 nt3.04□□□□□ -1.92
RAD3P06839 CIR1YGR207C 786 nt3.04□□□□□ -1.92
RAD3P06839 AIM25YJR100C 984 nt3.04□□□□□ -1.92
RAD3P06839 YAL069WYAL069W 315 nt3.04□□□□□ -1.92
RAD3P06839 COX14YML129C 213 nt3.04□□□□□ -1.92
RAD3P06839 YMR310CYMR310C 954 nt3.04□□□□□ -1.92
RAD3P06839 HRD1YOL013C 1656 nt3.04□□□□□ -1.92
RAD3P06839 YOR365CYOR365C 2112 nt3.04□□□□□ -1.92
RAD3P06839 PBI1YPL272C 1554 nt3.04□□□□□ -1.92
RAD3P06839 ESL2YKR096W 3588 nt3.04□□□□□ -1.92
RAD3P06839 EMP70YLR083C 2004 nt3.03□□□□□ -1.92
RAD3P06839 TFC1YBR123C 1950 nt3.03□□□□□ -1.92
RAD3P06839 RSN1YMR266W 2862 nt3.03□□□□□ -1.92
RAD3P06839 EDC1YGL222C 528 nt3.03□□□□□ -1.92
RAD3P06839 SDP1YIL113W 630 nt3.03□□□□□ -1.92
RAD3P06839 MSS4YDR208W 2340 nt3.03□□□□□ -1.92
RAD3P06839 YOR296WYOR296W 3870 nt3.03□□□□□ -1.92
RAD3P06839 YBL005W-BYBL005W-B 5268 nt3.03□□□□□ -1.92
RAD3P06839 CGR1YGL029W 363 nt3.02□□□□□ -1.93
RAD3P06839 DUO1YGL061C 744 nt3.02□□□□□ -1.93
RAD3P06839 PPX1YHR201C 1194 nt3.02□□□□□ -1.93
RAD3P06839 RCE1YMR274C 948 nt3.02□□□□□ -1.93
RAD3P06839 MDV1YJL112W 2145 nt3.02□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 19.2 ms