Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TPM3P06753 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TPM3P06753 RNF165-205ENST00000588679 2904 ntBASIC23.78■■□□□ 1.4
TPM3P06753 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM3P06753 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.78■■□□□ 1.4
TPM3P06753 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
TPM3P06753 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM3P06753 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TPM3P06753 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM3P06753 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TPM3P06753 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TPM3P06753 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.77■■□□□ 1.4
TPM3P06753 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.77■■□□□ 1.4
TPM3P06753 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC23.77■■□□□ 1.4
TPM3P06753 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TPM3P06753 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM3P06753 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
TPM3P06753 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
TPM3P06753 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.76■■□□□ 1.39
TPM3P06753 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.76■■□□□ 1.39
TPM3P06753 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TPM3P06753 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.76■■□□□ 1.39
TPM3P06753 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.76■■□□□ 1.39
TPM3P06753 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TPM3P06753 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
TPM3P06753 C17orf82-201ENST00000623772 1530 ntBASIC23.75■■□□□ 1.39
TPM3P06753 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.75■■□□□ 1.39
TPM3P06753 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.75■■□□□ 1.39
TPM3P06753 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.75■■□□□ 1.39
TPM3P06753 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
TPM3P06753 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.75■■□□□ 1.39
TPM3P06753 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.75■■□□□ 1.39
TPM3P06753 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
TPM3P06753 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.75■■□□□ 1.39
TPM3P06753 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 AL033527.3-201ENST00000566366 1196 ntBASIC23.75■■□□□ 1.39
TPM3P06753 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TPM3P06753 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TPM3P06753 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TPM3P06753 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TPM3P06753 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
TPM3P06753 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.74■■□□□ 1.39
TPM3P06753 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.74■■□□□ 1.39
TPM3P06753 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.74■■□□□ 1.39
TPM3P06753 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TPM3P06753 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TPM3P06753 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.74■■□□□ 1.39
TPM3P06753 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.74■■□□□ 1.39
TPM3P06753 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TPM3P06753 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.73■■□□□ 1.39
TPM3P06753 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
TPM3P06753 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.73■■□□□ 1.39
TPM3P06753 MTDHP2-201ENST00000601468 714 ntBASIC23.73■■□□□ 1.39
TPM3P06753 AC092028.1-203ENST00000608262 953 ntBASIC23.73■■□□□ 1.39
TPM3P06753 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TPM3P06753 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TPM3P06753 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TPM3P06753 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 AC104564.3-201ENST00000582367 638 ntBASIC23.72■■□□□ 1.39
TPM3P06753 AL499627.2-201ENST00000606283 725 ntBASIC23.72■■□□□ 1.39
TPM3P06753 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TPM3P06753 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TPM3P06753 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
TPM3P06753 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TPM3P06753 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TPM3P06753 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TPM3P06753 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM3P06753 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM3P06753 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM3P06753 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TPM3P06753 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TPM3P06753 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TPM3P06753 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms