Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
COL1A1P02452 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.83■■□□□ 1.73
COL1A1P02452 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL1A1P02452 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
COL1A1P02452 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC25.83■■□□□ 1.73
COL1A1P02452 AC026471.6-201ENST00000622954 1905 ntBASIC25.83■■□□□ 1.72
COL1A1P02452 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A1P02452 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A1P02452 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A1P02452 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL1A1P02452 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.82■■□□□ 1.72
COL1A1P02452 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC25.82■■□□□ 1.72
COL1A1P02452 AC010536.3-201ENST00000620306 533 ntBASIC25.82■■□□□ 1.72
COL1A1P02452 AC066615.1-201ENST00000640911 628 ntBASIC25.82■■□□□ 1.72
COL1A1P02452 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.81■■□□□ 1.72
COL1A1P02452 AC069152.1-201ENST00000438030 544 ntBASIC25.81■■□□□ 1.72
COL1A1P02452 AL138781.1-201ENST00000566567 1274 ntBASIC25.81■■□□□ 1.72
COL1A1P02452 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.81■■□□□ 1.72
COL1A1P02452 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
COL1A1P02452 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL1A1P02452 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A1P02452 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A1P02452 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
COL1A1P02452 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
COL1A1P02452 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A1P02452 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.8■■□□□ 1.72
COL1A1P02452 KRT18P20-201ENST00000548986 1279 ntBASIC25.8■■□□□ 1.72
COL1A1P02452 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.8■■□□□ 1.72
COL1A1P02452 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.8■■□□□ 1.72
COL1A1P02452 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A1P02452 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.8■■□□□ 1.72
COL1A1P02452 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A1P02452 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL1A1P02452 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
COL1A1P02452 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
COL1A1P02452 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
COL1A1P02452 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC25.79■■□□□ 1.72
COL1A1P02452 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC25.79■■□□□ 1.72
COL1A1P02452 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.79■■□□□ 1.72
COL1A1P02452 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.79■■□□□ 1.72
COL1A1P02452 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.79■■□□□ 1.72
COL1A1P02452 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC25.79■■□□□ 1.72
COL1A1P02452 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL1A1P02452 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.79■■□□□ 1.72
COL1A1P02452 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.79■■□□□ 1.72
COL1A1P02452 AC073210.2-201ENST00000430369 194 ntBASIC25.79■■□□□ 1.72
COL1A1P02452 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL1A1P02452 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
COL1A1P02452 AC003102.1-202ENST00000563394 1796 ntBASIC25.78■■□□□ 1.72
COL1A1P02452 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC25.78■■□□□ 1.72
COL1A1P02452 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
COL1A1P02452 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
COL1A1P02452 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.78■■□□□ 1.72
COL1A1P02452 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
COL1A1P02452 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC25.78■■□□□ 1.72
COL1A1P02452 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.78■■□□□ 1.72
COL1A1P02452 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.78■■□□□ 1.72
COL1A1P02452 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.78■■□□□ 1.72
COL1A1P02452 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
COL1A1P02452 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.77■■□□□ 1.72
COL1A1P02452 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
COL1A1P02452 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.77■■□□□ 1.72
COL1A1P02452 KLF13-207ENST00000560473 489 ntTSL 3 BASIC25.77■■□□□ 1.72
COL1A1P02452 MIR4651-201ENST00000582622 73 ntBASIC25.77■■□□□ 1.72
COL1A1P02452 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
COL1A1P02452 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC25.77■■□□□ 1.72
COL1A1P02452 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL1A1P02452 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A1P02452 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.76■■□□□ 1.71
COL1A1P02452 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC25.76■■□□□ 1.71
COL1A1P02452 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A1P02452 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
COL1A1P02452 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC25.76■■□□□ 1.71
COL1A1P02452 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.76■■□□□ 1.71
COL1A1P02452 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms