Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.83■■□□□ 1.41
PGK1P00558 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.83■■□□□ 1.41
PGK1P00558 MYC-209ENST00000641252 345 ntBASIC23.83■■□□□ 1.41
PGK1P00558 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PGK1P00558 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 AC097658.1-201ENST00000475555 843 ntBASIC23.82■■□□□ 1.4
PGK1P00558 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.82■■□□□ 1.4
PGK1P00558 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.82■■□□□ 1.4
PGK1P00558 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.82■■□□□ 1.4
PGK1P00558 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.82■■□□□ 1.4
PGK1P00558 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.82■■□□□ 1.4
PGK1P00558 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.82■■□□□ 1.4
PGK1P00558 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.82■■□□□ 1.4
PGK1P00558 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.82■■□□□ 1.4
PGK1P00558 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PGK1P00558 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.81■■□□□ 1.4
PGK1P00558 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC23.81■■□□□ 1.4
PGK1P00558 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.81■■□□□ 1.4
PGK1P00558 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.81■■□□□ 1.4
PGK1P00558 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.81■■□□□ 1.4
PGK1P00558 AC120498.10-201ENST00000621827 505 ntBASIC23.81■■□□□ 1.4
PGK1P00558 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PGK1P00558 AC093323.1-202ENST00000635031 2045 ntBASIC23.81■■□□□ 1.4
PGK1P00558 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.8■■□□□ 1.4
PGK1P00558 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.8■■□□□ 1.4
PGK1P00558 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.8■■□□□ 1.4
PGK1P00558 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PGK1P00558 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.8■■□□□ 1.4
PGK1P00558 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.8■■□□□ 1.4
PGK1P00558 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC23.8■■□□□ 1.4
PGK1P00558 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.8■■□□□ 1.4
PGK1P00558 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 AC008175.2-201ENST00000612840 297 ntBASIC23.8■■□□□ 1.4
PGK1P00558 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PGK1P00558 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.8■■□□□ 1.4
PGK1P00558 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.8■■□□□ 1.4
PGK1P00558 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PGK1P00558 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGK1P00558 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PGK1P00558 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC23.79■■□□□ 1.4
PGK1P00558 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.79■■□□□ 1.4
PGK1P00558 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.79■■□□□ 1.4
PGK1P00558 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGK1P00558 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
PGK1P00558 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PGK1P00558 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PGK1P00558 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PGK1P00558 GCSHP5-201ENST00000443090 522 ntBASIC23.78■■□□□ 1.4
PGK1P00558 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
PGK1P00558 AC091874.3-201ENST00000512672 1195 ntBASIC23.78■■□□□ 1.4
PGK1P00558 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PGK1P00558 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
PGK1P00558 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.78■■□□□ 1.4
PGK1P00558 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PGK1P00558 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PGK1P00558 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PGK1P00558 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PGK1P00558 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PGK1P00558 AC010980.2-201ENST00000587099 1412 ntBASIC23.77■■□□□ 1.4
PGK1P00558 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PGK1P00558 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PGK1P00558 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PGK1P00558 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.77■■□□□ 1.4
PGK1P00558 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.77■■□□□ 1.4
PGK1P00558 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.77■■□□□ 1.4
PGK1P00558 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.77■■□□□ 1.4
PGK1P00558 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.77■■□□□ 1.4
PGK1P00558 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.77■■□□□ 1.4
PGK1P00558 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PGK1P00558 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PGK1P00558 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms