Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
DHFRP00374 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
DHFRP00374 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.33■□□□□ 0.52
DHFRP00374 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DHFRP00374 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.33■□□□□ 0.52
DHFRP00374 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.32■□□□□ 0.52
DHFRP00374 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.32■□□□□ 0.52
DHFRP00374 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
DHFRP00374 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.32■□□□□ 0.52
DHFRP00374 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.32■□□□□ 0.52
DHFRP00374 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 DUX4L18-201ENST00000553347 1267 ntBASIC18.32■□□□□ 0.52
DHFRP00374 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
DHFRP00374 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.32■□□□□ 0.52
DHFRP00374 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.32■□□□□ 0.52
DHFRP00374 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DHFRP00374 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.32■□□□□ 0.52
DHFRP00374 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.31■□□□□ 0.52
DHFRP00374 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DHFRP00374 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.31■□□□□ 0.52
DHFRP00374 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.31■□□□□ 0.52
DHFRP00374 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DHFRP00374 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
DHFRP00374 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
DHFRP00374 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 TSPY13P-201ENST00000338964 914 ntBASIC18.3■□□□□ 0.52
DHFRP00374 ATP5G2P3-201ENST00000429083 425 ntBASIC18.3■□□□□ 0.52
DHFRP00374 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.3■□□□□ 0.52
DHFRP00374 AC011551.1-201ENST00000614101 683 ntBASIC18.3■□□□□ 0.52
DHFRP00374 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 AL020996.1-203ENST00000536896 2307 ntBASIC18.3■□□□□ 0.52
DHFRP00374 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.3■□□□□ 0.52
DHFRP00374 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.3■□□□□ 0.52
DHFRP00374 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DHFRP00374 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.3■□□□□ 0.52
DHFRP00374 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
DHFRP00374 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
DHFRP00374 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.29■□□□□ 0.52
DHFRP00374 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.29■□□□□ 0.52
DHFRP00374 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
DHFRP00374 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.29■□□□□ 0.52
DHFRP00374 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
DHFRP00374 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.29■□□□□ 0.52
DHFRP00374 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
DHFRP00374 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
DHFRP00374 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.29■□□□□ 0.52
DHFRP00374 AC087289.5-201ENST00000586076 3175 ntBASIC18.29■□□□□ 0.52
DHFRP00374 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.29■□□□□ 0.52
DHFRP00374 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
DHFRP00374 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.28■□□□□ 0.52
DHFRP00374 OXCT2P1-201ENST00000447263 1535 ntBASIC18.28■□□□□ 0.52
DHFRP00374 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
DHFRP00374 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
DHFRP00374 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.28■□□□□ 0.52
DHFRP00374 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms