Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 PKD1P6-201ENST00000343738 4769 ntBASIC18.97■□□□□ 0.63
CLDN1O95832 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
CLDN1O95832 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 AC068473.5-201ENST00000616428 2072 ntBASIC18.97■□□□□ 0.63
CLDN1O95832 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN1O95832 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN1O95832 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLDN1O95832 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CLDN1O95832 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN1O95832 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CLDN1O95832 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN1O95832 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.96■□□□□ 0.63
CLDN1O95832 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
CLDN1O95832 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.96■□□□□ 0.63
CLDN1O95832 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN1O95832 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN1O95832 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN1O95832 AC009237.3-201ENST00000393279 1427 ntBASIC18.96■□□□□ 0.63
CLDN1O95832 AC068338.2-201ENST00000563278 1430 ntBASIC18.96■□□□□ 0.63
CLDN1O95832 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN1O95832 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN1O95832 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN1O95832 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN1O95832 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN1O95832 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN1O95832 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN1O95832 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN1O95832 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN1O95832 AC013268.1-206ENST00000638368 961 ntBASIC18.95■□□□□ 0.62
CLDN1O95832 AC112229.1-201ENST00000639295 961 ntBASIC18.95■□□□□ 0.62
CLDN1O95832 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN1O95832 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN1O95832 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN1O95832 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN1O95832 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN1O95832 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN1O95832 AC093787.1-201ENST00000450396 207 ntBASIC18.94■□□□□ 0.62
CLDN1O95832 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN1O95832 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.94■□□□□ 0.62
CLDN1O95832 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN1O95832 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN1O95832 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN1O95832 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CLDN1O95832 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN1O95832 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.93■□□□□ 0.62
CLDN1O95832 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN1O95832 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.93■□□□□ 0.62
CLDN1O95832 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CLDN1O95832 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN1O95832 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.93■□□□□ 0.62
CLDN1O95832 MYC-209ENST00000641252 345 ntBASIC18.93■□□□□ 0.62
CLDN1O95832 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.93■□□□□ 0.62
CLDN1O95832 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CLDN1O95832 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN1O95832 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN1O95832 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN1O95832 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CLDN1O95832 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CLDN1O95832 ECEL1P3-201ENST00000427961 737 ntBASIC18.92■□□□□ 0.62
CLDN1O95832 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.92■□□□□ 0.62
CLDN1O95832 AC008550.1-201ENST00000511500 884 ntBASIC18.92■□□□□ 0.62
CLDN1O95832 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.92■□□□□ 0.62
CLDN1O95832 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CLDN1O95832 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CLDN1O95832 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN1O95832 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN1O95832 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.92■□□□□ 0.62
CLDN1O95832 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLDN1O95832 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms