Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT4O95628 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT4O95628 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT4O95628 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CNOT4O95628 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT4O95628 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.85■□□□□ 0.61
CNOT4O95628 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.85■□□□□ 0.61
CNOT4O95628 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNOT4O95628 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CNOT4O95628 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 AP004607.4-201ENST00000530158 1459 ntBASIC18.84■□□□□ 0.61
CNOT4O95628 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.84■□□□□ 0.61
CNOT4O95628 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.84■□□□□ 0.61
CNOT4O95628 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.84■□□□□ 0.61
CNOT4O95628 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.84■□□□□ 0.61
CNOT4O95628 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT4O95628 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.84■□□□□ 0.61
CNOT4O95628 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.84■□□□□ 0.61
CNOT4O95628 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNOT4O95628 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CNOT4O95628 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT4O95628 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT4O95628 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT4O95628 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT4O95628 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CNOT4O95628 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT4O95628 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CNOT4O95628 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.83■□□□□ 0.6
CNOT4O95628 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.83■□□□□ 0.6
CNOT4O95628 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNOT4O95628 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.83■□□□□ 0.6
CNOT4O95628 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.83■□□□□ 0.6
CNOT4O95628 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.83■□□□□ 0.6
CNOT4O95628 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 AC092053.2-201ENST00000640557 1818 ntBASIC18.83■□□□□ 0.6
CNOT4O95628 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CNOT4O95628 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.83■□□□□ 0.6
CNOT4O95628 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNOT4O95628 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT4O95628 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT4O95628 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.82■□□□□ 0.6
CNOT4O95628 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.82■□□□□ 0.6
CNOT4O95628 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT4O95628 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.82■□□□□ 0.6
CNOT4O95628 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT4O95628 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT4O95628 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CNOT4O95628 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CNOT4O95628 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNOT4O95628 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNOT4O95628 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.81■□□□□ 0.6
CNOT4O95628 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
CNOT4O95628 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CNOT4O95628 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.81■□□□□ 0.6
CNOT4O95628 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT4O95628 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT4O95628 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.81■□□□□ 0.6
CNOT4O95628 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.81■□□□□ 0.6
CNOT4O95628 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT4O95628 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT4O95628 AC004854.2-201ENST00000608450 1441 ntBASIC18.81■□□□□ 0.6
CNOT4O95628 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CNOT4O95628 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
CNOT4O95628 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.81■□□□□ 0.6
CNOT4O95628 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNOT4O95628 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.81■□□□□ 0.6
CNOT4O95628 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms