Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF1O95521 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF1O95521 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF1O95521 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF1O95521 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PRAMEF1O95521 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PRAMEF1O95521 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF1O95521 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF1O95521 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF1O95521 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF1O95521 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF1O95521 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF1O95521 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF1O95521 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF1O95521 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.17■□□□□ 0.98
PRAMEF1O95521 TERF1P2-201ENST00000583350 1212 ntBASIC21.17■□□□□ 0.98
PRAMEF1O95521 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.17■□□□□ 0.98
PRAMEF1O95521 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF1O95521 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF1O95521 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PRAMEF1O95521 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PRAMEF1O95521 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.16■□□□□ 0.98
PRAMEF1O95521 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.16■□□□□ 0.98
PRAMEF1O95521 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEF1O95521 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEF1O95521 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PRAMEF1O95521 MIR935-201ENST00000401179 91 ntBASIC21.16■□□□□ 0.98
PRAMEF1O95521 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 AC079140.4-201ENST00000507448 529 ntBASIC21.16■□□□□ 0.98
PRAMEF1O95521 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.16■□□□□ 0.98
PRAMEF1O95521 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 CCDC92B-201ENST00000575506 885 ntBASIC21.16■□□□□ 0.98
PRAMEF1O95521 AC104564.3-201ENST00000582367 638 ntBASIC21.16■□□□□ 0.98
PRAMEF1O95521 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF1O95521 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.15■□□□□ 0.98
PRAMEF1O95521 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF1O95521 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 AC097381.1-201ENST00000429019 1296 ntBASIC21.15■□□□□ 0.98
PRAMEF1O95521 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF1O95521 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.15■□□□□ 0.98
PRAMEF1O95521 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF1O95521 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.15■□□□□ 0.98
PRAMEF1O95521 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF1O95521 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.14■□□□□ 0.98
PRAMEF1O95521 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PRAMEF1O95521 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.14■□□□□ 0.98
PRAMEF1O95521 KRT18P14-201ENST00000534205 1250 ntBASIC21.14■□□□□ 0.97
PRAMEF1O95521 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
PRAMEF1O95521 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF1O95521 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF1O95521 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF1O95521 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF1O95521 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF1O95521 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF1O95521 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.13■□□□□ 0.97
PRAMEF1O95521 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF1O95521 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.13■□□□□ 0.97
PRAMEF1O95521 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF1O95521 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms