Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.76■□□□□ 0.75
TRIM3O75382 CCDC92B-201ENST00000575506 885 ntBASIC19.76■□□□□ 0.75
TRIM3O75382 TERF1P2-201ENST00000583350 1212 ntBASIC19.76■□□□□ 0.75
TRIM3O75382 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM3O75382 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM3O75382 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TRIM3O75382 AC087742.1-201ENST00000575880 1738 ntBASIC19.76■□□□□ 0.75
TRIM3O75382 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM3O75382 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM3O75382 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TRIM3O75382 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM3O75382 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM3O75382 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM3O75382 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM3O75382 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM3O75382 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L2-201ENST00000561772 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L6-201ENST00000626483 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L1-201ENST00000627662 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L8-201ENST00000629013 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L3-201ENST00000630187 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L7-201ENST00000630678 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 DUX4L5-201ENST00000630834 1275 ntBASIC19.75■□□□□ 0.75
TRIM3O75382 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TRIM3O75382 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM3O75382 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM3O75382 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
TRIM3O75382 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM3O75382 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM3O75382 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM3O75382 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM3O75382 AL162430.1-201ENST00000480705 870 ntBASIC19.74■□□□□ 0.75
TRIM3O75382 AL137060.1-201ENST00000618151 2648 ntBASIC19.74■□□□□ 0.75
TRIM3O75382 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM3O75382 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM3O75382 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM3O75382 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM3O75382 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM3O75382 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM3O75382 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRIM3O75382 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TRIM3O75382 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM3O75382 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM3O75382 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM3O75382 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM3O75382 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM3O75382 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRIM3O75382 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM3O75382 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM3O75382 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRIM3O75382 KRT18P14-201ENST00000534205 1250 ntBASIC19.72■□□□□ 0.75
TRIM3O75382 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM3O75382 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM3O75382 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM3O75382 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.71■□□□□ 0.75
TRIM3O75382 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM3O75382 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM3O75382 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM3O75382 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM3O75382 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM3O75382 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM3O75382 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM3O75382 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM3O75382 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM3O75382 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM3O75382 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM3O75382 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM3O75382 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms