Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF11O60813 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF11O60813 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PRAMEF11O60813 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.66■■□□□ 1.06
PRAMEF11O60813 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PRAMEF11O60813 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF11O60813 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF11O60813 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 AP004607.4-201ENST00000530158 1459 ntBASIC21.65■■□□□ 1.06
PRAMEF11O60813 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF11O60813 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF11O60813 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF11O60813 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF11O60813 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 EEF1DP3-203ENST00000566025 782 ntBASIC21.65■■□□□ 1.06
PRAMEF11O60813 AC104564.3-201ENST00000582367 638 ntBASIC21.65■■□□□ 1.06
PRAMEF11O60813 KRT18P61-201ENST00000585825 1298 ntBASIC21.65■■□□□ 1.06
PRAMEF11O60813 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEF11O60813 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEF11O60813 AC004854.2-201ENST00000608450 1441 ntBASIC21.64■■□□□ 1.06
PRAMEF11O60813 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEF11O60813 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEF11O60813 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 NTF6G-201ENST00000591094 616 ntBASIC21.64■■□□□ 1.05
PRAMEF11O60813 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEF11O60813 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.63■■□□□ 1.05
PRAMEF11O60813 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRAMEF11O60813 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF11O60813 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF11O60813 KRT18P5-201ENST00000436075 1291 ntBASIC21.62■■□□□ 1.05
PRAMEF11O60813 AL162430.1-201ENST00000480705 870 ntBASIC21.62■■□□□ 1.05
PRAMEF11O60813 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 AC053503.5-201ENST00000601508 636 ntBASIC21.62■■□□□ 1.05
PRAMEF11O60813 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF11O60813 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.62■■□□□ 1.05
PRAMEF11O60813 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRAMEF11O60813 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 LINC00565-201ENST00000562710 2331 ntBASIC21.61■■□□□ 1.05
PRAMEF11O60813 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.61■■□□□ 1.05
PRAMEF11O60813 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 FBXW4P1-201ENST00000426721 2239 ntBASIC21.61■■□□□ 1.05
PRAMEF11O60813 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRAMEF11O60813 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms