Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.62■■□□□ 1.05
RIPK2O43353 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.61■■□□□ 1.05
RIPK2O43353 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.61■■□□□ 1.05
RIPK2O43353 KRT125P-201ENST00000546827 989 ntBASIC21.61■■□□□ 1.05
RIPK2O43353 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 AC241377.3-202ENST00000626088 1088 ntBASIC21.61■■□□□ 1.05
RIPK2O43353 AC241585.3-202ENST00000628937 1088 ntBASIC21.61■■□□□ 1.05
RIPK2O43353 AC245100.8-202ENST00000629247 1058 ntBASIC21.61■■□□□ 1.05
RIPK2O43353 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RIPK2O43353 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RIPK2O43353 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.6■■□□□ 1.05
RIPK2O43353 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RIPK2O43353 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RIPK2O43353 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
RIPK2O43353 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
RIPK2O43353 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
RIPK2O43353 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RIPK2O43353 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.59■■□□□ 1.05
RIPK2O43353 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIPK2O43353 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
RIPK2O43353 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIPK2O43353 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RIPK2O43353 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RIPK2O43353 AL117332.1-201ENST00000622628 974 ntBASIC21.59■■□□□ 1.05
RIPK2O43353 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RIPK2O43353 AC068587.7-201ENST00000641602 218 ntBASIC21.59■■□□□ 1.05
RIPK2O43353 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIPK2O43353 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RIPK2O43353 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RIPK2O43353 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK2O43353 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK2O43353 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK2O43353 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RIPK2O43353 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RIPK2O43353 AC006455.2-201ENST00000429931 906 ntBASIC21.58■■□□□ 1.05
RIPK2O43353 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.58■■□□□ 1.05
RIPK2O43353 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RIPK2O43353 MIR4787-201ENST00000607364 84 ntBASIC21.58■■□□□ 1.05
RIPK2O43353 pRNA.6-201ENST00000610482 90 ntBASIC21.58■■□□□ 1.05
RIPK2O43353 pRNA.5-201ENST00000612139 90 ntBASIC21.58■■□□□ 1.05
RIPK2O43353 pRNA.11-201ENST00000618423 90 ntBASIC21.58■■□□□ 1.05
RIPK2O43353 pRNA.13-201ENST00000619112 90 ntBASIC21.58■■□□□ 1.05
RIPK2O43353 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RIPK2O43353 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.58■■□□□ 1.05
RIPK2O43353 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RIPK2O43353 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.58■■□□□ 1.04
RIPK2O43353 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 AC003102.1-202ENST00000563394 1796 ntBASIC21.57■■□□□ 1.04
RIPK2O43353 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
RIPK2O43353 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.57■■□□□ 1.04
RIPK2O43353 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
RIPK2O43353 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.57■■□□□ 1.04
RIPK2O43353 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
RIPK2O43353 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
RIPK2O43353 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RIPK2O43353 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.56■■□□□ 1.04
RIPK2O43353 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RIPK2O43353 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RIPK2O43353 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RIPK2O43353 GABARAPL3-202ENST00000624044 1851 ntBASIC21.56■■□□□ 1.04
RIPK2O43353 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
RIPK2O43353 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK2O43353 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK2O43353 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK2O43353 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK2O43353 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
RIPK2O43353 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms