Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SOX1O00570 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.97■■□□□ 1.27
SOX1O00570 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.97■■□□□ 1.27
SOX1O00570 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.97■■□□□ 1.27
SOX1O00570 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.97■■□□□ 1.27
SOX1O00570 PNMA6B-201ENST00000538162 1200 ntBASIC22.97■■□□□ 1.27
SOX1O00570 MIR4785-201ENST00000585005 73 ntBASIC22.97■■□□□ 1.27
SOX1O00570 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SOX1O00570 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SOX1O00570 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.97■■□□□ 1.27
SOX1O00570 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
SOX1O00570 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOX1O00570 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.96■■□□□ 1.27
SOX1O00570 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.96■■□□□ 1.27
SOX1O00570 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOX1O00570 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SOX1O00570 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.96■■□□□ 1.27
SOX1O00570 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.96■■□□□ 1.27
SOX1O00570 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.96■■□□□ 1.27
SOX1O00570 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.96■■□□□ 1.27
SOX1O00570 AL162412.1-201ENST00000567129 965 ntBASIC22.96■■□□□ 1.27
SOX1O00570 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC22.96■■□□□ 1.27
SOX1O00570 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOX1O00570 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SOX1O00570 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SOX1O00570 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SOX1O00570 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.95■■□□□ 1.26
SOX1O00570 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.95■■□□□ 1.26
SOX1O00570 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.95■■□□□ 1.26
SOX1O00570 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
SOX1O00570 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.95■■□□□ 1.26
SOX1O00570 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.95■■□□□ 1.26
SOX1O00570 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SOX1O00570 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC22.95■■□□□ 1.26
SOX1O00570 AL591742.1-201ENST00000604433 565 ntBASIC22.95■■□□□ 1.26
SOX1O00570 SNX21-213ENST00000614929 587 ntTSL 5 BASIC22.95■■□□□ 1.26
SOX1O00570 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SOX1O00570 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SOX1O00570 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.94■■□□□ 1.26
SOX1O00570 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC22.94■■□□□ 1.26
SOX1O00570 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SOX1O00570 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SOX1O00570 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.94■■□□□ 1.26
SOX1O00570 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.94■■□□□ 1.26
SOX1O00570 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SOX1O00570 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SOX1O00570 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOX1O00570 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.93■■□□□ 1.26
SOX1O00570 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SOX1O00570 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.93■■□□□ 1.26
SOX1O00570 AL355472.2-201ENST00000422958 438 ntBASIC22.93■■□□□ 1.26
SOX1O00570 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.93■■□□□ 1.26
SOX1O00570 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.93■■□□□ 1.26
SOX1O00570 EEF1DP3-203ENST00000566025 782 ntBASIC22.93■■□□□ 1.26
SOX1O00570 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOX1O00570 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOX1O00570 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.93■■□□□ 1.26
SOX1O00570 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SOX1O00570 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.93■■□□□ 1.26
SOX1O00570 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
SOX1O00570 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.92■■□□□ 1.26
SOX1O00570 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.92■■□□□ 1.26
SOX1O00570 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.92■■□□□ 1.26
SOX1O00570 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.92■■□□□ 1.26
SOX1O00570 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.92■■□□□ 1.26
SOX1O00570 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC22.92■■□□□ 1.26
SOX1O00570 AL353708.3-201ENST00000610272 989 ntBASIC22.92■■□□□ 1.26
SOX1O00570 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
SOX1O00570 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SOX1O00570 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SOX1O00570 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SOX1O00570 AC135731.1-201ENST00000569415 2548 ntBASIC22.91■■□□□ 1.26
SOX1O00570 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.91■■□□□ 1.26
SOX1O00570 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.91■■□□□ 1.26
SOX1O00570 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SOX1O00570 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.91■■□□□ 1.26
SOX1O00570 AL121894.2-201ENST00000602977 491 ntBASIC22.91■■□□□ 1.26
SOX1O00570 AC092865.7-201ENST00000641832 219 ntBASIC22.91■■□□□ 1.26
SOX1O00570 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
SOX1O00570 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SOX1O00570 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SOX1O00570 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
SOX1O00570 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SOX1O00570 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
SOX1O00570 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
SOX1O00570 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SOX1O00570 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.9■■□□□ 1.26
SOX1O00570 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.9■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms