Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM5B3KS81 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.9■□□□□ 0.46
SRRM5B3KS81 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SRRM5B3KS81 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SRRM5B3KS81 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SRRM5B3KS81 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.89■□□□□ 0.46
SRRM5B3KS81 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM5B3KS81 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SRRM5B3KS81 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRRM5B3KS81 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.88■□□□□ 0.45
SRRM5B3KS81 AC244015.2-201ENST00000616358 1861 ntBASIC17.88■□□□□ 0.45
SRRM5B3KS81 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.88■□□□□ 0.45
SRRM5B3KS81 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.88■□□□□ 0.45
SRRM5B3KS81 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 AC034268.1-201ENST00000441047 882 ntBASIC17.88■□□□□ 0.45
SRRM5B3KS81 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.88■□□□□ 0.45
SRRM5B3KS81 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.88■□□□□ 0.45
SRRM5B3KS81 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.88■□□□□ 0.45
SRRM5B3KS81 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRRM5B3KS81 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.87■□□□□ 0.45
SRRM5B3KS81 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 TERF1P2-201ENST00000583350 1212 ntBASIC17.87■□□□□ 0.45
SRRM5B3KS81 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SRRM5B3KS81 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRRM5B3KS81 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.86■□□□□ 0.45
SRRM5B3KS81 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRRM5B3KS81 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRRM5B3KS81 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.85■□□□□ 0.45
SRRM5B3KS81 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRRM5B3KS81 AC079140.4-201ENST00000507448 529 ntBASIC17.85■□□□□ 0.45
SRRM5B3KS81 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.85■□□□□ 0.45
SRRM5B3KS81 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SRRM5B3KS81 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.85■□□□□ 0.45
SRRM5B3KS81 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.85■□□□□ 0.45
SRRM5B3KS81 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SRRM5B3KS81 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM5B3KS81 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM5B3KS81 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SRRM5B3KS81 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM5B3KS81 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SRRM5B3KS81 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SRRM5B3KS81 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms