Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SH3D21A4FU49 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.67■□□□□ 0.74
SH3D21A4FU49 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.66■□□□□ 0.74
SH3D21A4FU49 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.66■□□□□ 0.74
SH3D21A4FU49 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SH3D21A4FU49 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 pRNA.6-201ENST00000610482 90 ntBASIC19.65■□□□□ 0.74
SH3D21A4FU49 pRNA.5-201ENST00000612139 90 ntBASIC19.65■□□□□ 0.74
SH3D21A4FU49 pRNA.11-201ENST00000618423 90 ntBASIC19.65■□□□□ 0.74
SH3D21A4FU49 pRNA.13-201ENST00000619112 90 ntBASIC19.65■□□□□ 0.74
SH3D21A4FU49 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SH3D21A4FU49 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SH3D21A4FU49 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3D21A4FU49 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3D21A4FU49 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SH3D21A4FU49 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SH3D21A4FU49 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SH3D21A4FU49 AC087623.3-201ENST00000607047 1098 ntBASIC19.64■□□□□ 0.73
SH3D21A4FU49 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SH3D21A4FU49 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.64■□□□□ 0.73
SH3D21A4FU49 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SH3D21A4FU49 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SH3D21A4FU49 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 FEM1AP4-201ENST00000443167 1987 ntBASIC19.63■□□□□ 0.73
SH3D21A4FU49 LINC01521-201ENST00000504184 1943 ntBASIC19.63■□□□□ 0.73
SH3D21A4FU49 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SH3D21A4FU49 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SH3D21A4FU49 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.63■□□□□ 0.73
SH3D21A4FU49 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.63■□□□□ 0.73
SH3D21A4FU49 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3D21A4FU49 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SH3D21A4FU49 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3D21A4FU49 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3D21A4FU49 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3D21A4FU49 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.62■□□□□ 0.73
SH3D21A4FU49 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SH3D21A4FU49 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SH3D21A4FU49 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SH3D21A4FU49 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SH3D21A4FU49 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms