Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
SHISA3A0PJX4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHISA3A0PJX4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 AC021242.3-201ENST00000607598 1377 ntBASIC18.56■□□□□ 0.56
SHISA3A0PJX4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHISA3A0PJX4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.55■□□□□ 0.56
SHISA3A0PJX4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.54■□□□□ 0.56
SHISA3A0PJX4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 PLK5-205ENST00000642079 1969 ntBASIC18.53■□□□□ 0.56
SHISA3A0PJX4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.53■□□□□ 0.56
SHISA3A0PJX4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.53■□□□□ 0.56
SHISA3A0PJX4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms