Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV12-3A0A0B4J271 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV12-3A0A0B4J271 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV12-3A0A0B4J271 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-3A0A0B4J271 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV12-3A0A0B4J271 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TRAV12-3A0A0B4J271 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.77■□□□□ 0.12
TRAV12-3A0A0B4J271 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV12-3A0A0B4J271 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
TRAV12-3A0A0B4J271 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV12-3A0A0B4J271 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV12-3A0A0B4J271 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
TRAV12-3A0A0B4J271 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 UNC93B3-201ENST00000308076 687 ntBASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 AP005435.1-201ENST00000529293 1178 ntBASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 AC104564.3-201ENST00000582367 638 ntBASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV12-3A0A0B4J271 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 Z98882.1-201ENST00000622160 2253 ntBASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 AP004607.7-201ENST00000527152 1677 ntBASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV12-3A0A0B4J271 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 MIR4767-201ENST00000582827 78 ntBASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV12-3A0A0B4J271 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms