Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 OR7E47P-201ENST00000546390 1422 ntBASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 KRT125P-201ENST00000546827 989 ntBASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AL031602.1-201ENST00000633169 911 ntBASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC092667.1-201ENST00000434301 2586 ntBASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAV8-1A0A0A6YYK1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AL451085.2-201ENST00000605085 799 ntBASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC010997.5-201ENST00000609182 354 ntBASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-1A0A0A6YYK1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC133637.1-201ENST00000624115 1537 ntBASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TSPY9P-201ENST00000440215 945 ntBASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TSPY11P-201ENST00000442607 1045 ntBASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 MIR4787-201ENST00000607364 84 ntBASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-1A0A0A6YYK1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
TRAV8-1A0A0A6YYK1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.08■□□□□ 0.17
TRAV8-1A0A0A6YYK1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-1A0A0A6YYK1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms