Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.8□□□□□ -0.04
TRBV6-8A0A0A6YYG3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRBV6-8A0A0A6YYG3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 AC233992.3-201ENST00000607491 485 ntBASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 AL136162.1-201ENST00000607711 1078 ntBASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRBV6-8A0A0A6YYG3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 AC135279.3-201ENST00000610945 1311 ntBASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRBV6-8A0A0A6YYG3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 AC005229.4-201ENST00000610085 2198 ntBASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRBV6-8A0A0A6YYG3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC024257.2-201ENST00000549699 147 ntBASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC126544.1-201ENST00000580842 1059 ntBASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC008406.3-201ENST00000620001 1374 ntBASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC003102.1-202ENST00000563394 1796 ntBASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 FEM1AP4-201ENST00000443167 1987 ntBASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 AP006587.3-201ENST00000525742 1516 ntBASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.75□□□□□ -0.05
TRBV6-8A0A0A6YYG3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms