Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRBV6-7A0A0A0MS04 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC104564.3-201ENST00000582367 638 ntBASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC087239.1-201ENST00000622671 572 ntBASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRBV6-7A0A0A0MS04 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC092171.4-201ENST00000609130 632 ntBASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 AL035685.1-201ENST00000636663 812 ntBASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRBV6-7A0A0A0MS04 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRBV6-7A0A0A0MS04 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TRBV6-7A0A0A0MS04 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-7A0A0A0MS04 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRBV6-7A0A0A0MS04 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 SRD5A1P1-201ENST00000442297 786 ntBASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 AC010141.3-201ENST00000456659 717 ntBASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRBV6-7A0A0A0MS04 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 GUSBP5-201ENST00000418136 578 ntBASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRBV6-7A0A0A0MS04 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms