Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV9-1A0A075B6T8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 LINC01529-204ENST00000636474 1715 ntBASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 RPS2P7-201ENST00000447334 885 ntBASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16■□□□□ 0.15
TRAV9-1A0A075B6T8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 AL162393.1-201ENST00000437852 946 ntBASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 AC006128.1-201ENST00000624704 1661 ntBASIC15.99■□□□□ 0.15
TRAV9-1A0A075B6T8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 LBH-205ENST00000407930 756 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV9-1A0A075B6T8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 FP325331.1-202ENST00000623531 1380 ntBASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV9-1A0A075B6T8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV9-1A0A075B6T8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms