Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 BAHD1-201ENST00000416165 4526 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 PRAMEF15-201ENST00000376152 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 PNMA8A-201ENST00000313683 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 CALCR-202ENST00000360249 1502 ntTSL 5 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 USP4-204ENST00000416417 1536 ntTSL 2 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 RPF2-203ENST00000441448 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.06□□□□□ -0.48
LMO3Q8TAP4 CAPRIN2-201ENST00000298892 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 ABCB9-206ENST00000442028 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 RPS14-202ENST00000401695 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 NRG1-212ENST00000521670 1769 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 NELL2-204ENST00000437801 3279 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 ZNF577-214ENST00000639636 3148 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AGBL1-AS1-202ENST00000564487 1642 ntTSL 3 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 C8orf17-202ENST00000625034 2775 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 KIFAP3-206ENST00000538366 3159 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 MTMR10-202ENST00000563714 2216 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 SLC12A4-219ENST00000576616 3768 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 NIPAL1-201ENST00000295461 5300 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 ABCD4-201ENST00000356924 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 RESP18-202ENST00000392083 626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 WDR45P1-201ENST00000502774 1082 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 SNCA-AS1-202ENST00000513653 801 ntTSL 3 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 HNRNPCP6-201ENST00000525816 871 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 KRTAP2-1-202ENST00000542137 375 ntTSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC008760.1-201ENST00000594056 686 ntTSL 3 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 ZNF563-203ENST00000595977 958 ntTSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC005387.2-201ENST00000596596 440 ntTSL 3 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 CYP2G1P-202ENST00000597833 870 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 PET100-205ENST00000601406 332 ntTSL 2 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC015660.4-201ENST00000621331 621 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 CDK10-222ENST00000625631 140 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 SNORD3D-202ENST00000630092 217 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC037471.1-201ENST00000554586 1699 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC127381.2-201ENST00000560680 1699 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 VANGL1-203ENST00000369509 2062 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC239800.2-201ENST00000443018 2675 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 TIPIN-201ENST00000261881 1744 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 GLRA1-202ENST00000455880 1707 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 AC110053.1-201ENST00000523156 1744 ntBASIC12.05□□□□□ -0.48
LMO3Q8TAP4 TNNT2-224ENST00000509001 1330 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 GIT2-209ENST00000547815 2989 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 HBS1L-203ENST00000367822 2793 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 CNKSR2-201ENST00000279451 4478 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 CD300LF-203ENST00000343125 1554 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
LMO3Q8TAP4 IL7-210ENST00000541183 2020 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 ARHGAP5-AS1-201ENST00000553596 1848 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 SEPT8-210ENST00000448933 4270 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AL163195.2-205ENST00000554993 1892 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 LHX6-202ENST00000373754 3278 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 DAW1-201ENST00000309931 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 EVL-214ENST00000555048 1715 ntTSL 3 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 ZNRD1ASP-212ENST00000420251 2430 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 THRSP-201ENST00000281030 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 HMGN2P17-201ENST00000425872 743 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 TSPY24P-201ENST00000431340 443 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AKR1B1P2-201ENST00000494640 934 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC044839.1-201ENST00000532307 541 ntTSL 5 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC091544.3-202ENST00000554246 373 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 DOCK9-AS2-201ENST00000562781 807 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC125421.1-201ENST00000583854 1140 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC093159.2-201ENST00000603429 636 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AP000553.1-201ENST00000610143 430 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AL121845.4-201ENST00000613401 306 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 MIR486-2-201ENST00000637446 64 ntBASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC005906.2-216ENST00000638736 1212 ntTSL 5 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 PRKACB-206ENST00000370689 4513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC016876.2-201ENST00000581621 4554 ntTSL 2 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
LMO3Q8TAP4 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms