Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 IGFL4-201ENST00000377697 573 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AL627095.1-201ENST00000414775 321 ntBASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AC007881.2-201ENST00000434990 570 ntTSL 4 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 FXYD4-201ENST00000476166 770 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 BTN2A2-209ENST00000482536 1068 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 OCIAD1-226ENST00000513391 1288 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 TRMT112-205ENST00000539854 659 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AC254633.1-201ENST00000606790 345 ntBASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AC027644.3-201ENST00000607978 557 ntBASIC12.11□□□□□ -0.47
LMO3Q8TAP4 LINC00893-212ENST00000609161 524 ntTSL 4 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AC016597.1-203ENST00000610941 947 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 IL7-211ENST00000639719 597 ntTSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 MED24-203ENST00000394127 3456 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 PNPLA4-201ENST00000381042 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 PDE6B-201ENST00000255622 3280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 EPB41L2-208ENST00000524581 3090 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 AC022107.1-201ENST00000624833 3094 ntBASIC12.11□□□□□ -0.47
LMO3Q8TAP4 GRPEL1-201ENST00000264954 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 PMEL-206ENST00000548747 2757 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 E2F8-202ENST00000527884 3432 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 DGCR2-205ENST00000537045 4361 ntTSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 FAM196A-201ENST00000424811 3149 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LMO3Q8TAP4 EEF1GP5-201ENST00000434365 1310 ntBASIC12.11□□□□□ -0.47
LMO3Q8TAP4 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 DAP3-202ENST00000368336 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CMTR1-201ENST00000373451 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CDRT1-202ENST00000354433 1557 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AL355602.1-201ENST00000641472 3402 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 PSMA8-201ENST00000308268 1804 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 KIAA1147-201ENST00000482493 1847 ntTSL 5 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 MR1-203ENST00000367579 1154 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 DDB2-204ENST00000378603 1092 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CXorf40A-206ENST00000428236 887 ntTSL 3 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AL031770.1-201ENST00000430842 851 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 COPZ1-202ENST00000455864 880 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 RN7SL617P-201ENST00000485298 308 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AC064799.1-201ENST00000498103 555 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 HMGN2P4-201ENST00000506772 381 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AC137579.1-201ENST00000519978 836 ntTSL 3 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 IGLCOR22-1-201ENST00000523725 316 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 FANCI-214ENST00000567996 1070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 LINC01177-201ENST00000568030 536 ntTSL 3 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 FAM223B-202ENST00000598177 713 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 FAM223A-202ENST00000625204 713 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CTCFL-212ENST00000539382 2262 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AC004490.1-201ENST00000585593 2738 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 FAM49B-220ENST00000522250 1647 ntTSL 5 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 GFI1B-201ENST00000339463 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 NAMPT-201ENST00000222553 4582 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CNTN2-232ENST00000640428 4146 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 OR11A1-201ENST00000377147 2229 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 STXBP5-AS1-201ENST00000367477 2927 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 ARHGEF2-202ENST00000313695 4080 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 MCPH1-207ENST00000522905 2049 ntTSL 2 BASIC12.1□□□□□ -0.47
LMO3Q8TAP4 AF131215.6-201ENST00000602575 2014 ntBASIC12.1□□□□□ -0.47
LMO3Q8TAP4 TSPYL6-201ENST00000317802 3089 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 FBXO36-203ENST00000409992 1911 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 ARFGAP2-205ENST00000524782 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 WDR33-204ENST00000409658 3104 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TG-208ENST00000519543 3132 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CSRP1-216ENST00000532460 1469 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 LILRB1-201ENST00000324602 2774 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 ROR2-201ENST00000375708 4096 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 C10orf53-204ENST00000535836 2090 ntTSL 5 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 FILIP1L-204ENST00000398326 1712 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 TNIK-206ENST00000460047 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 SRP14-AS1-201ENST00000504245 2317 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 CDC40-202ENST00000368930 1977 ntTSL 2 BASIC12.09□□□□□ -0.47
LMO3Q8TAP4 SETD2-209ENST00000638947 1984 ntTSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms