Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 CALCB-201ENST00000324229 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 COA3-201ENST00000328434 771 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TRPM8-202ENST00000355722 904 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 DDB2-204ENST00000378603 1092 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P04436 TSEN15P3-201ENST00000422363 367 ntBASIC10.49□□□□□ -0.73
P04436 RPL36P20-201ENST00000423702 319 ntBASIC10.49□□□□□ -0.73
P04436 AL627313.1-201ENST00000428860 238 ntBASIC10.49□□□□□ -0.73
P04436 AC112778.1-201ENST00000433306 827 ntBASIC10.49□□□□□ -0.73
P04436 ATF4P1-201ENST00000443279 1073 ntBASIC10.49□□□□□ -0.73
P04436 AC093157.1-201ENST00000453011 794 ntTSL 3 BASIC10.49□□□□□ -0.73
P04436 AL365357.1-201ENST00000455621 357 ntBASIC10.49□□□□□ -0.73
P04436 ATP6V1F-202ENST00000492758 711 ntTSL 2 BASIC10.49□□□□□ -0.73
P04436 HOXA-AS2-205ENST00000518088 509 ntTSL 3 BASIC10.49□□□□□ -0.73
P04436 SPON1-AS1-201ENST00000534587 240 ntTSL 3 BASIC10.49□□□□□ -0.73
P04436 AC091544.2-201ENST00000555864 414 ntTSL 3 BASIC10.49□□□□□ -0.73
P04436 AL049871.1-201ENST00000557475 880 ntTSL 5 BASIC10.49□□□□□ -0.73
P04436 AC020978.3-202ENST00000563175 457 ntTSL 3 BASIC10.49□□□□□ -0.73
P04436 SAT2-208ENST00000573566 640 ntTSL 2 BASIC10.49□□□□□ -0.73
P04436 ATF4P2-201ENST00000601944 1073 ntBASIC10.49□□□□□ -0.73
P04436 AC016737.1-201ENST00000605739 1068 ntBASIC10.49□□□□□ -0.73
P04436 FAM74A3-201ENST00000620271 472 ntBASIC10.49□□□□□ -0.73
P04436 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 Vax2os1_3.1-201ENST00000622578 197 ntBASIC10.49□□□□□ -0.73
P04436 AC073488.4-201ENST00000632688 757 ntBASIC10.49□□□□□ -0.73
P04436 AL138921.3-201ENST00000636357 992 ntBASIC10.49□□□□□ -0.73
P04436 AC007493.1-201ENST00000637635 683 ntTSL 5 BASIC10.49□□□□□ -0.73
P04436 MECP2-226ENST00000640414 897 ntTSL 5 BASIC10.49□□□□□ -0.73
P04436 AC084337.2-202ENST00000640959 595 ntAPPRIS P5 TSL 4 BASIC10.49□□□□□ -0.73
P04436 CMC1-205ENST00000466830 6033 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TREM1-201ENST00000244709 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TIMM22-201ENST00000327158 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TNNT2-224ENST00000509001 1330 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
P04436 CDKL3-201ENST00000265334 2130 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
P04436 DPY19L2P1-202ENST00000454445 2909 ntBASIC10.49□□□□□ -0.73
P04436 KBTBD12-203ENST00000405256 5268 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
P04436 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TP53-204ENST00000420246 2653 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 TP53-227ENST00000622645 2653 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 SLC13A3-211ENST00000495082 1887 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
P04436 AC092139.4-201ENST00000624318 2794 ntBASIC10.48□□□□□ -0.73
P04436 CWH43-204ENST00000513409 2390 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P04436 KMT2A-201ENST00000389506 13655 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 KDM8-201ENST00000286096 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 DCLK3-201ENST00000416516 5344 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P04436 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
P04436 RRN3P2-202ENST00000564580 2132 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 GOLGA2P5-203ENST00000397112 2632 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 SLC12A6-202ENST00000354181 4568 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 ALK-205ENST00000618119 4646 ntTSL 5 BASIC10.48□□□□□ -0.73
P04436 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
P04436 CBWD3-206ENST00000478048 1736 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 ATP8A1-201ENST00000264449 8209 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 AC099489.3-201ENST00000572950 2279 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 GGNBP1-201ENST00000374458 960 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 PLP2-202ENST00000376327 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 DDR1-227ENST00000376570 3820 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 RCL1-203ENST00000381732 804 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 AL022722.1-201ENST00000406333 582 ntBASIC10.48□□□□□ -0.73
P04436 SHANK2-AS2-201ENST00000429268 356 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC10.48□□□□□ -0.73
P04436 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 RPSAP4-201ENST00000488229 888 ntBASIC10.48□□□□□ -0.73
P04436 AKR1B1P2-201ENST00000494640 934 ntBASIC10.48□□□□□ -0.73
P04436 AC112722.1-201ENST00000514884 587 ntTSL 4 BASIC10.48□□□□□ -0.73
P04436 MIR2277-201ENST00000515916 93 ntBASIC10.48□□□□□ -0.73
P04436 RNA5SP408-201ENST00000516115 100 ntBASIC10.48□□□□□ -0.73
P04436 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
P04436 NDUFC2-KCTD14-201ENST00000528251 566 ntTSL 4 BASIC10.48□□□□□ -0.73
P04436 RBM4-212ENST00000532968 757 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC10.48□□□□□ -0.73
P04436 HNRNPA1P69-201ENST00000552536 933 ntBASIC10.48□□□□□ -0.73
P04436 AL133299.1-201ENST00000565968 507 ntTSL 3 BASIC10.48□□□□□ -0.73
P04436 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC10.48□□□□□ -0.73
P04436 AC110285.1-201ENST00000572077 665 ntTSL 3 BASIC10.48□□□□□ -0.73
P04436 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 AP001180.5-201ENST00000581948 730 ntBASIC10.48□□□□□ -0.73
P04436 AC005154.1-231ENST00000583664 431 ntTSL 4 BASIC10.48□□□□□ -0.73
P04436 AC010636.1-201ENST00000598116 628 ntTSL 3 BASIC10.48□□□□□ -0.73
P04436 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC10.48□□□□□ -0.73
P04436 C5orf60-208ENST00000625191 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
P04436 AC006453.2-203ENST00000637196 774 ntTSL 2 BASIC10.48□□□□□ -0.73
P04436 MIEF1-215ENST00000637854 213 ntBASIC10.48□□□□□ -0.73
P04436 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 376.9 ms