Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
COMMD3-BMI1R4GMX3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC087742.1-201ENST00000575880 1738 ntBASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC026471.1-201ENST00000564629 3026 ntBASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC103724.3-201ENST00000564481 992 ntBASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COMMD3-BMI1R4GMX3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.93■□□□□ 0.78
COMMD3-BMI1R4GMX3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 Z98882.1-201ENST00000622160 2253 ntBASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 YBX1P4-201ENST00000392794 808 ntBASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 LETM1P2-201ENST00000597330 2178 ntBASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.92■□□□□ 0.78
COMMD3-BMI1R4GMX3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 SNX5-217ENST00000606557 1087 ntBASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COMMD3-BMI1R4GMX3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COMMD3-BMI1R4GMX3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
COMMD3-BMI1R4GMX3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COMMD3-BMI1R4GMX3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms