Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LSM2Q9Y333 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.97■□□□□ 0.63
LSM2Q9Y333 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM2Q9Y333 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM2Q9Y333 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LSM2Q9Y333 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LSM2Q9Y333 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LSM2Q9Y333 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LSM2Q9Y333 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
LSM2Q9Y333 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.96■□□□□ 0.63
LSM2Q9Y333 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LSM2Q9Y333 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.95■□□□□ 0.62
LSM2Q9Y333 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LSM2Q9Y333 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.95■□□□□ 0.62
LSM2Q9Y333 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 RNF165-205ENST00000588679 2904 ntBASIC18.95■□□□□ 0.62
LSM2Q9Y333 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LSM2Q9Y333 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 AC004987.1-201ENST00000428627 508 ntBASIC18.94■□□□□ 0.62
LSM2Q9Y333 ATP5G2P3-201ENST00000429083 425 ntBASIC18.94■□□□□ 0.62
LSM2Q9Y333 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.94■□□□□ 0.62
LSM2Q9Y333 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LSM2Q9Y333 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM2Q9Y333 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LSM2Q9Y333 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LSM2Q9Y333 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM2Q9Y333 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LSM2Q9Y333 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LSM2Q9Y333 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LSM2Q9Y333 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
LSM2Q9Y333 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LSM2Q9Y333 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.91■□□□□ 0.62
LSM2Q9Y333 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms