Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGB4Q9UN71 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB4Q9UN71 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB4Q9UN71 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGB4Q9UN71 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGB4Q9UN71 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGB4Q9UN71 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 AC133637.1-201ENST00000624115 1537 ntBASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 pRNA.6-201ENST00000610482 90 ntBASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 pRNA.5-201ENST00000612139 90 ntBASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 pRNA.11-201ENST00000618423 90 ntBASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 pRNA.13-201ENST00000619112 90 ntBASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGB4Q9UN71 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGB4Q9UN71 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 GUSBP5-201ENST00000418136 578 ntBASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 AC099791.2-201ENST00000605725 427 ntBASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 AC092171.4-201ENST00000609130 632 ntBASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGB4Q9UN71 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGB4Q9UN71 MIR3621-201ENST00000580529 85 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms