Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 AC006455.2-201ENST00000429931 906 ntBASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CPSF2Q9P2I0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 AC244015.2-201ENST00000616358 1861 ntBASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CPSF2Q9P2I0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 AL356740.2-201ENST00000601559 647 ntBASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 pRNA.6-201ENST00000610482 90 ntBASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 pRNA.5-201ENST00000612139 90 ntBASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 pRNA.11-201ENST00000618423 90 ntBASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 pRNA.13-201ENST00000619112 90 ntBASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CPSF2Q9P2I0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CPSF2Q9P2I0 AC133637.1-201ENST00000624115 1537 ntBASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 GUSBP5-201ENST00000418136 578 ntBASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 AC099791.2-201ENST00000605725 427 ntBASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CPSF2Q9P2I0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.33■■□□□ 1.01
CPSF2Q9P2I0 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
CPSF2Q9P2I0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.33■■□□□ 1
CPSF2Q9P2I0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CPSF2Q9P2I0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CPSF2Q9P2I0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPSF2Q9P2I0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
CPSF2Q9P2I0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.33■■□□□ 1
CPSF2Q9P2I0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms