Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 AF106564.1-201ENST00000607058 2553 ntBASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
LRTM1Q9HBL6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 AL136116.3-201ENST00000402907 1138 ntBASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
LRTM1Q9HBL6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.46■□□□□ 0.87
LRTM1Q9HBL6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LRTM1Q9HBL6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRTM1Q9HBL6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.44■□□□□ 0.86
LRTM1Q9HBL6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 AC003102.1-202ENST00000563394 1796 ntBASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRTM1Q9HBL6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 AL024507.2-201ENST00000606070 2574 ntBASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRTM1Q9HBL6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms