Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 BX005040.4-201ENST00000637145 1518 ntBASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 AL109923.1-201ENST00000618799 583 ntBASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
POLR1BQ9H9Y6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 ANOS2P-203ENST00000472227 1816 ntBASIC21■□□□□ 0.95
POLR1BQ9H9Y6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
POLR1BQ9H9Y6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 ABHD17AP1-201ENST00000358206 933 ntBASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 AL355802.2-201ENST00000402069 882 ntBASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
POLR1BQ9H9Y6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 DUSP8P3-201ENST00000399571 1760 ntBASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 CROCCP5-201ENST00000436658 830 ntBASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
POLR1BQ9H9Y6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 KRT18P11-201ENST00000435214 1283 ntBASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
POLR1BQ9H9Y6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 NCF1B-203ENST00000435988 1254 ntBASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 AC068587.7-201ENST00000641602 218 ntBASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR1BQ9H9Y6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.95■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms