Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MAP1LC3AQ9H492 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MAP1LC3AQ9H492 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 OXCT2P1-201ENST00000447263 1535 ntBASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 AC022616.5-201ENST00000518796 181 ntBASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MAP1LC3AQ9H492 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 FEM1AP1-201ENST00000431297 1995 ntBASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 FP325331.1-202ENST00000623531 1380 ntBASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 ABHD17AP4-201ENST00000411545 909 ntBASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 SPCS2P3-201ENST00000500401 656 ntBASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 AC104564.3-201ENST00000582367 638 ntBASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MAP1LC3AQ9H492 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.52■□□□□ 0.08
MAP1LC3AQ9H492 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MAP1LC3AQ9H492 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MAP1LC3AQ9H492 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 AL592293.1-201ENST00000502889 1188 ntBASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MAP1LC3AQ9H492 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms