Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 RN7SL471P-201ENST00000580476 299 ntBASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 AC055733.4-201ENST00000638462 1354 ntBASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 AC005224.4-201ENST00000583262 1652 ntBASIC20.42■□□□□ 0.86
CNTNAP3Q9BZ76 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 AC007322.4-201ENST00000509611 723 ntBASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP3Q9BZ76 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP3Q9BZ76 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CNTNAP3Q9BZ76 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 AC012618.2-201ENST00000428058 849 ntBASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 KRT18P20-201ENST00000548986 1279 ntBASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 AC233702.5-201ENST00000584107 538 ntBASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP3Q9BZ76 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP3Q9BZ76 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNTNAP3Q9BZ76 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 ALDH1A3-203ENST00000557963 1670 ntBASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 RPS2P55-201ENST00000397318 883 ntBASIC20.36■□□□□ 0.85
CNTNAP3Q9BZ76 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms