Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RPAP1Q9BWH6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 KRT19P1-201ENST00000405746 1186 ntBASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RPAP1Q9BWH6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 BID-214ENST00000617586 542 ntTSL 5 BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RPAP1Q9BWH6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RPAP1Q9BWH6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.01■■□□□ 1.75
RPAP1Q9BWH6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.01■■□□□ 1.75
RPAP1Q9BWH6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RPAP1Q9BWH6 WWC2-AS2-201ENST00000578387 2183 ntBASIC26■■□□□ 1.75
RPAP1Q9BWH6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPAP1Q9BWH6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPAP1Q9BWH6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPAP1Q9BWH6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPAP1Q9BWH6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26■■□□□ 1.75
RPAP1Q9BWH6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26■■□□□ 1.75
RPAP1Q9BWH6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RPAP1Q9BWH6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
RPAP1Q9BWH6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 AC026185.1-201ENST00000445748 174 ntBASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RPAP1Q9BWH6 AC092053.2-201ENST00000640557 1818 ntBASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 AC079089.2-201ENST00000531211 1277 ntBASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RPAP1Q9BWH6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RPAP1Q9BWH6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.96■■□□□ 1.75
RPAP1Q9BWH6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 KRT18P11-201ENST00000435214 1283 ntBASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
RPAP1Q9BWH6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
RPAP1Q9BWH6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms