Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.9■□□□□ 0.62
COL12A1Q99715 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL12A1Q99715 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
COL12A1Q99715 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.89■□□□□ 0.62
COL12A1Q99715 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
COL12A1Q99715 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.89■□□□□ 0.61
COL12A1Q99715 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL12A1Q99715 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL12A1Q99715 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COL12A1Q99715 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.89■□□□□ 0.61
COL12A1Q99715 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.89■□□□□ 0.61
COL12A1Q99715 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL12A1Q99715 RN7SL471P-201ENST00000580476 299 ntBASIC18.89■□□□□ 0.61
COL12A1Q99715 CD177P1-201ENST00000606252 935 ntBASIC18.89■□□□□ 0.61
COL12A1Q99715 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.89■□□□□ 0.61
COL12A1Q99715 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.88■□□□□ 0.61
COL12A1Q99715 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.88■□□□□ 0.61
COL12A1Q99715 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL12A1Q99715 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.88■□□□□ 0.61
COL12A1Q99715 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
COL12A1Q99715 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.88■□□□□ 0.61
COL12A1Q99715 AC055733.4-201ENST00000638462 1354 ntBASIC18.88■□□□□ 0.61
COL12A1Q99715 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL12A1Q99715 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL12A1Q99715 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.88■□□□□ 0.61
COL12A1Q99715 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.88■□□□□ 0.61
COL12A1Q99715 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL12A1Q99715 DUSP8P4-201ENST00000399538 1761 ntBASIC18.88■□□□□ 0.61
COL12A1Q99715 AL353803.4-201ENST00000565882 1934 ntBASIC18.88■□□□□ 0.61
COL12A1Q99715 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.87■□□□□ 0.61
COL12A1Q99715 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL12A1Q99715 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL12A1Q99715 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
COL12A1Q99715 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.87■□□□□ 0.61
COL12A1Q99715 AC010980.2-201ENST00000587099 1412 ntBASIC18.87■□□□□ 0.61
COL12A1Q99715 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL12A1Q99715 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL12A1Q99715 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.87■□□□□ 0.61
COL12A1Q99715 AC012618.2-201ENST00000428058 849 ntBASIC18.87■□□□□ 0.61
COL12A1Q99715 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL12A1Q99715 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.87■□□□□ 0.61
COL12A1Q99715 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.87■□□□□ 0.61
COL12A1Q99715 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL12A1Q99715 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL12A1Q99715 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.86■□□□□ 0.61
COL12A1Q99715 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COL12A1Q99715 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.86■□□□□ 0.61
COL12A1Q99715 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.86■□□□□ 0.61
COL12A1Q99715 AC010141.3-201ENST00000456659 717 ntBASIC18.86■□□□□ 0.61
COL12A1Q99715 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COL12A1Q99715 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.86■□□□□ 0.61
COL12A1Q99715 CYP2T3P-201ENST00000601990 817 ntBASIC18.86■□□□□ 0.61
COL12A1Q99715 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.86■□□□□ 0.61
COL12A1Q99715 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL12A1Q99715 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
COL12A1Q99715 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL12A1Q99715 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL12A1Q99715 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL12A1Q99715 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.85■□□□□ 0.61
COL12A1Q99715 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL12A1Q99715 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL12A1Q99715 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
COL12A1Q99715 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.85■□□□□ 0.61
COL12A1Q99715 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL12A1Q99715 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL12A1Q99715 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL12A1Q99715 OXCT2P1-201ENST00000447263 1535 ntBASIC18.84■□□□□ 0.61
COL12A1Q99715 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL12A1Q99715 AL049597.2-201ENST00000565575 961 ntBASIC18.84■□□□□ 0.61
COL12A1Q99715 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.84■□□□□ 0.61
COL12A1Q99715 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.84■□□□□ 0.61
COL12A1Q99715 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL12A1Q99715 RPS2P55-201ENST00000397318 883 ntBASIC18.84■□□□□ 0.61
COL12A1Q99715 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.84■□□□□ 0.61
COL12A1Q99715 AC107956.1-201ENST00000494359 873 ntBASIC18.84■□□□□ 0.61
COL12A1Q99715 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL12A1Q99715 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL12A1Q99715 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL12A1Q99715 AC010141.2-201ENST00000452426 721 ntBASIC18.83■□□□□ 0.61
COL12A1Q99715 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.83■□□□□ 0.61
COL12A1Q99715 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.83■□□□□ 0.61
COL12A1Q99715 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.83■□□□□ 0.61
COL12A1Q99715 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.83■□□□□ 0.61
COL12A1Q99715 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.83■□□□□ 0.61
COL12A1Q99715 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL12A1Q99715 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL12A1Q99715 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL12A1Q99715 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
COL12A1Q99715 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
COL12A1Q99715 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
COL12A1Q99715 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL12A1Q99715 TSPY7P-201ENST00000431358 1114 ntBASIC18.83■□□□□ 0.6
COL12A1Q99715 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL12A1Q99715 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL12A1Q99715 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL12A1Q99715 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.83■□□□□ 0.6
COL12A1Q99715 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL12A1Q99715 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.82■□□□□ 0.6
COL12A1Q99715 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL12A1Q99715 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms