Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX18Q96RF0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNX18Q96RF0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 SRD5A1P1-201ENST00000442297 786 ntBASIC19.34■□□□□ 0.69
SNX18Q96RF0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX18Q96RF0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX18Q96RF0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SNX18Q96RF0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX18Q96RF0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX18Q96RF0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX18Q96RF0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SNX18Q96RF0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
SNX18Q96RF0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX18Q96RF0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX18Q96RF0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNX18Q96RF0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX18Q96RF0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.33■□□□□ 0.69
SNX18Q96RF0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SNX18Q96RF0 MIR3181-201ENST00000578512 73 ntBASIC19.33■□□□□ 0.68
SNX18Q96RF0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX18Q96RF0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.33■□□□□ 0.68
SNX18Q96RF0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX18Q96RF0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX18Q96RF0 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX18Q96RF0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX18Q96RF0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX18Q96RF0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.32■□□□□ 0.68
SNX18Q96RF0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX18Q96RF0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX18Q96RF0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 AC010542.4-201ENST00000563151 1910 ntBASIC19.31■□□□□ 0.68
SNX18Q96RF0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX18Q96RF0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.31■□□□□ 0.68
SNX18Q96RF0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 AL138724.1-201ENST00000606771 1088 ntBASIC19.3■□□□□ 0.68
SNX18Q96RF0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SNX18Q96RF0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SNX18Q96RF0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX18Q96RF0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX18Q96RF0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX18Q96RF0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX18Q96RF0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX18Q96RF0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX18Q96RF0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.29■□□□□ 0.68
SNX18Q96RF0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SNX18Q96RF0 AC087239.1-201ENST00000622671 572 ntBASIC19.29■□□□□ 0.68
SNX18Q96RF0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SNX18Q96RF0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SNX18Q96RF0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms