Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.81■■□□□ 1.08
ZIM3Q96PE6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 AC073314.1-201ENST00000568729 2216 ntBASIC21.8■■□□□ 1.08
ZIM3Q96PE6 PCDHAC2-203ENST00000615316 3011 ntBASIC21.8■■□□□ 1.08
ZIM3Q96PE6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
ZIM3Q96PE6 AC005703.6-201ENST00000623265 1329 ntBASIC21.8■■□□□ 1.08
ZIM3Q96PE6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 DUX4L18-201ENST00000553347 1267 ntBASIC21.79■■□□□ 1.08
ZIM3Q96PE6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ZIM3Q96PE6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 PVT1_1.1-201ENST00000615125 194 ntBASIC21.78■■□□□ 1.08
ZIM3Q96PE6 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZIM3Q96PE6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 AC074183.2-201ENST00000623112 922 ntBASIC21.77■■□□□ 1.08
ZIM3Q96PE6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZIM3Q96PE6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
ZIM3Q96PE6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
ZIM3Q96PE6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
ZIM3Q96PE6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms