Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
COL21A1Q96P44 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.1■□□□□ 0.81
COL21A1Q96P44 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 AC010141.3-201ENST00000456659 717 ntBASIC20.1■□□□□ 0.81
COL21A1Q96P44 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL21A1Q96P44 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.1■□□□□ 0.81
COL21A1Q96P44 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.1■□□□□ 0.81
COL21A1Q96P44 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL21A1Q96P44 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL21A1Q96P44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.09■□□□□ 0.81
COL21A1Q96P44 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL21A1Q96P44 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.09■□□□□ 0.81
COL21A1Q96P44 IGHV3-19-201ENST00000521488 291 ntBASIC20.09■□□□□ 0.81
COL21A1Q96P44 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
COL21A1Q96P44 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL21A1Q96P44 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL21A1Q96P44 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COL21A1Q96P44 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL21A1Q96P44 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL21A1Q96P44 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL21A1Q96P44 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL21A1Q96P44 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COL21A1Q96P44 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL21A1Q96P44 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.08■□□□□ 0.81
COL21A1Q96P44 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.08■□□□□ 0.8
COL21A1Q96P44 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL21A1Q96P44 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COL21A1Q96P44 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL21A1Q96P44 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL21A1Q96P44 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.08■□□□□ 0.8
COL21A1Q96P44 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
COL21A1Q96P44 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 AC026310.3-201ENST00000625186 2373 ntBASIC20.07■□□□□ 0.8
COL21A1Q96P44 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 AC079089.2-201ENST00000531211 1277 ntBASIC20.07■□□□□ 0.8
COL21A1Q96P44 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.07■□□□□ 0.8
COL21A1Q96P44 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL21A1Q96P44 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.06■□□□□ 0.8
COL21A1Q96P44 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 TSPY26P-201ENST00000476365 1326 ntBASIC20.06■□□□□ 0.8
COL21A1Q96P44 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
COL21A1Q96P44 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL21A1Q96P44 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COL21A1Q96P44 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 AC105265.2-201ENST00000467189 838 ntBASIC20.05■□□□□ 0.8
COL21A1Q96P44 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL21A1Q96P44 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.05■□□□□ 0.8
COL21A1Q96P44 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms