Protein–RNA interactions for Protein: Q96JP9

CDHR1, Cadherin-related family member 1, humanhuman

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1Q96JP9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDHR1Q96JP9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC24.02■■□□□ 1.44
CDHR1Q96JP9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.02■■□□□ 1.44
CDHR1Q96JP9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.02■■□□□ 1.44
CDHR1Q96JP9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 AC080038.3-201ENST00000623346 1952 ntBASIC24.01■■□□□ 1.43
CDHR1Q96JP9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDHR1Q96JP9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDHR1Q96JP9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24■■□□□ 1.43
CDHR1Q96JP9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24■■□□□ 1.43
CDHR1Q96JP9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24■■□□□ 1.43
CDHR1Q96JP9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CDHR1Q96JP9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24■■□□□ 1.43
CDHR1Q96JP9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24■■□□□ 1.43
CDHR1Q96JP9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC24■■□□□ 1.43
CDHR1Q96JP9 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDHR1Q96JP9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDHR1Q96JP9 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 SLC7A5P1-201ENST00000568957 537 ntBASIC23.99■■□□□ 1.43
CDHR1Q96JP9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.99■■□□□ 1.43
CDHR1Q96JP9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.98■■□□□ 1.43
CDHR1Q96JP9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 ID1-201ENST00000376105 1233 ntBASIC23.97■■□□□ 1.43
CDHR1Q96JP9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 AC008175.2-201ENST00000612840 297 ntBASIC23.97■■□□□ 1.43
CDHR1Q96JP9 AC231657.2-201ENST00000624556 255 ntBASIC23.97■■□□□ 1.43
CDHR1Q96JP9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDHR1Q96JP9 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 AC120498.10-201ENST00000621827 505 ntBASIC23.96■■□□□ 1.43
CDHR1Q96JP9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDHR1Q96JP9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
CDHR1Q96JP9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 POU5F1P4-201ENST00000413175 1085 ntBASIC23.95■■□□□ 1.42
CDHR1Q96JP9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.95■■□□□ 1.42
CDHR1Q96JP9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.94■■□□□ 1.42
CDHR1Q96JP9 DUX4L16-201ENST00000555130 1264 ntBASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms