Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.27■□□□□ 0.84
LRRC58Q96CX6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC58Q96CX6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC58Q96CX6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.27■□□□□ 0.83
LRRC58Q96CX6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRRC58Q96CX6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 AC068587.7-201ENST00000641602 218 ntBASIC20.26■□□□□ 0.83
LRRC58Q96CX6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRRC58Q96CX6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 pRNA.6-201ENST00000610482 90 ntBASIC20.25■□□□□ 0.83
LRRC58Q96CX6 pRNA.5-201ENST00000612139 90 ntBASIC20.25■□□□□ 0.83
LRRC58Q96CX6 pRNA.11-201ENST00000618423 90 ntBASIC20.25■□□□□ 0.83
LRRC58Q96CX6 pRNA.13-201ENST00000619112 90 ntBASIC20.25■□□□□ 0.83
LRRC58Q96CX6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 AL049796.1-201ENST00000565336 1766 ntBASIC20.25■□□□□ 0.83
LRRC58Q96CX6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRRC58Q96CX6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 TSPY9P-201ENST00000440215 945 ntBASIC20.24■□□□□ 0.83
LRRC58Q96CX6 TSPY11P-201ENST00000442607 1045 ntBASIC20.24■□□□□ 0.83
LRRC58Q96CX6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.24■□□□□ 0.83
LRRC58Q96CX6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LRRC58Q96CX6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 AC006455.2-201ENST00000429931 906 ntBASIC20.23■□□□□ 0.83
LRRC58Q96CX6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LRRC58Q96CX6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 AC239859.2-201ENST00000444165 318 ntBASIC20.22■□□□□ 0.83
LRRC58Q96CX6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.22■□□□□ 0.83
LRRC58Q96CX6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.21■□□□□ 0.83
LRRC58Q96CX6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms