Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
TUBGCP3Q96CW5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
TUBGCP3Q96CW5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 MIR3621-201ENST00000580529 85 ntBASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBGCP3Q96CW5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 SRD5A1P1-201ENST00000442297 786 ntBASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 AC010141.3-201ENST00000456659 717 ntBASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 AL035685.1-201ENST00000636663 812 ntBASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TUBGCP3Q96CW5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
TUBGCP3Q96CW5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.64■□□□□ 0.9
TUBGCP3Q96CW5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
TUBGCP3Q96CW5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBGCP3Q96CW5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.64■□□□□ 0.9
TUBGCP3Q96CW5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 AC092171.4-201ENST00000609130 632 ntBASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBGCP3Q96CW5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBGCP3Q96CW5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 AC010525.1-201ENST00000585559 441 ntBASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBGCP3Q96CW5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBGCP3Q96CW5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms