Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 YBX1P1-201ENST00000445822 960 ntBASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CTHRC1Q96CG8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 AC104564.3-201ENST00000582367 638 ntBASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.85■□□□□ 0.77
CTHRC1Q96CG8 LINC02228-203ENST00000641970 1355 ntBASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTHRC1Q96CG8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.83■□□□□ 0.77
CTHRC1Q96CG8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTHRC1Q96CG8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.83■□□□□ 0.77
CTHRC1Q96CG8 TERF1P2-201ENST00000583350 1212 ntBASIC19.83■□□□□ 0.77
CTHRC1Q96CG8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.83■□□□□ 0.77
CTHRC1Q96CG8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTHRC1Q96CG8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTHRC1Q96CG8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 RARRES2P6-201ENST00000567333 442 ntBASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTHRC1Q96CG8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms