Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
ATP6V0A1Q93050 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.94■■□□□ 1.42
ATP6V0A1Q93050 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.93■■□□□ 1.42
ATP6V0A1Q93050 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 MIR663A-201ENST00000385250 93 ntBASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 MFSD11-216ENST00000590393 1141 ntBASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 AL109923.1-201ENST00000618799 583 ntBASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.92■■□□□ 1.42
ATP6V0A1Q93050 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
ATP6V0A1Q93050 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 NCF1B-203ENST00000435988 1254 ntBASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ATP6V0A1Q93050 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.89■■□□□ 1.42
ATP6V0A1Q93050 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
ATP6V0A1Q93050 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.89■■□□□ 1.42
ATP6V0A1Q93050 AC092053.2-201ENST00000640557 1818 ntBASIC23.89■■□□□ 1.42
ATP6V0A1Q93050 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
ATP6V0A1Q93050 AC068473.5-201ENST00000616428 2072 ntBASIC23.89■■□□□ 1.41
ATP6V0A1Q93050 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
ATP6V0A1Q93050 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.89■■□□□ 1.41
ATP6V0A1Q93050 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.89■■□□□ 1.41
ATP6V0A1Q93050 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 AL355802.2-201ENST00000402069 882 ntBASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ATP6V0A1Q93050 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 UBE2DNL-204ENST00000602536 740 ntBASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.87■■□□□ 1.41
ATP6V0A1Q93050 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms