Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPB3Q92617 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NPIPB3Q92617 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPB3Q92617 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPB3Q92617 OR2I1P-207ENST00000453522 948 ntBASIC16.8■□□□□ 0.28
NPIPB3Q92617 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.8■□□□□ 0.28
NPIPB3Q92617 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPB3Q92617 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPB3Q92617 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.8■□□□□ 0.28
NPIPB3Q92617 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
NPIPB3Q92617 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NPIPB3Q92617 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPB3Q92617 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPB3Q92617 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPB3Q92617 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.79■□□□□ 0.28
NPIPB3Q92617 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NPIPB3Q92617 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 AC010141.3-201ENST00000456659 717 ntBASIC16.79■□□□□ 0.28
NPIPB3Q92617 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.79■□□□□ 0.28
NPIPB3Q92617 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.79■□□□□ 0.28
NPIPB3Q92617 AC092171.4-201ENST00000609130 632 ntBASIC16.79■□□□□ 0.28
NPIPB3Q92617 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NPIPB3Q92617 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPB3Q92617 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPB3Q92617 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPB3Q92617 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPB3Q92617 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 GUSBP5-201ENST00000418136 578 ntBASIC16.78■□□□□ 0.28
NPIPB3Q92617 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.78■□□□□ 0.28
NPIPB3Q92617 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPB3Q92617 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NPIPB3Q92617 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.78■□□□□ 0.28
NPIPB3Q92617 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
NPIPB3Q92617 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPB3Q92617 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.77■□□□□ 0.28
NPIPB3Q92617 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.77■□□□□ 0.28
NPIPB3Q92617 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
NPIPB3Q92617 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NPIPB3Q92617 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPB3Q92617 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPB3Q92617 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
NPIPB3Q92617 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.77■□□□□ 0.27
NPIPB3Q92617 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NPIPB3Q92617 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPB3Q92617 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPB3Q92617 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPB3Q92617 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPB3Q92617 AC010525.1-201ENST00000585559 441 ntBASIC16.76■□□□□ 0.27
NPIPB3Q92617 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPB3Q92617 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPB3Q92617 OXCT2P1-201ENST00000447263 1535 ntBASIC16.75■□□□□ 0.27
NPIPB3Q92617 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPB3Q92617 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.75■□□□□ 0.27
NPIPB3Q92617 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPB3Q92617 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPIPB3Q92617 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPB3Q92617 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPB3Q92617 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms