Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 PPP1R14BP2-201ENST00000426284 444 ntBASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 AC008694.1-202ENST00000636953 945 ntBASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC28.16■■■□□ 2.1
RAPGEF4Q8WZA2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 AC120498.10-201ENST00000621827 505 ntBASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
RAPGEF4Q8WZA2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 AC093787.1-201ENST00000450396 207 ntBASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 AC069236.1-201ENST00000604339 616 ntBASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 AC016405.3-201ENST00000607710 860 ntBASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 AC008175.2-201ENST00000612840 297 ntBASIC28.14■■■□□ 2.1
RAPGEF4Q8WZA2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.09
RAPGEF4Q8WZA2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
RAPGEF4Q8WZA2 AC137767.1-201ENST00000602918 1920 ntBASIC28.14■■■□□ 2.09
RAPGEF4Q8WZA2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
RAPGEF4Q8WZA2 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 RNA5SP413-201ENST00000516373 109 ntBASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
RAPGEF4Q8WZA2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 AL512625.2-201ENST00000417533 625 ntBASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 POU5F1P3-201ENST00000428824 1078 ntBASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
RAPGEF4Q8WZA2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 AC092118.2-201ENST00000613495 667 ntBASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
RAPGEF4Q8WZA2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 POU5F1P4-201ENST00000413175 1085 ntBASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 AC087742.1-201ENST00000575880 1738 ntBASIC28.09■■■□□ 2.09
RAPGEF4Q8WZA2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
RAPGEF4Q8WZA2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.08■■■□□ 2.09
RAPGEF4Q8WZA2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC28.08■■■□□ 2.09
RAPGEF4Q8WZA2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
RAPGEF4Q8WZA2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC28.08■■■□□ 2.09
RAPGEF4Q8WZA2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms