Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TMEM40Q8WWA1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TMEM40Q8WWA1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 AC142086.2-201ENST00000569753 217 ntBASIC23.35■■□□□ 1.33
TMEM40Q8WWA1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.34■■□□□ 1.33
TMEM40Q8WWA1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.33■■□□□ 1.33
TMEM40Q8WWA1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TMEM40Q8WWA1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 C1orf229-201ENST00000623686 2258 ntBASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TMEM40Q8WWA1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 AL138781.1-201ENST00000566567 1274 ntBASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 SLC7A5P1-201ENST00000568957 537 ntBASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TMEM40Q8WWA1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.3■■□□□ 1.32
TMEM40Q8WWA1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
TMEM40Q8WWA1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms