Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.45■■□□□ 1.18
SHKBP1Q8TBC3 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 DUX4L16-201ENST00000555130 1264 ntBASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 AL050303.2-201ENST00000619798 666 ntBASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SHKBP1Q8TBC3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 LINC00526-201ENST00000581067 1875 ntBASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 OR7E47P-201ENST00000546390 1422 ntBASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 MYCNOS-205ENST00000641950 531 ntBASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SHKBP1Q8TBC3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 GPX1P1-201ENST00000388829 606 ntBASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.42■■□□□ 1.18
SHKBP1Q8TBC3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SHKBP1Q8TBC3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 AC231657.2-201ENST00000624556 255 ntBASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SHKBP1Q8TBC3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
SHKBP1Q8TBC3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 AC010141.2-201ENST00000452426 721 ntBASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SHKBP1Q8TBC3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms