Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 AC098934.4-201ENST00000564127 592 ntBASIC18.52■□□□□ 0.56
LINC01560Q8TB33 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LINC01560Q8TB33 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01560Q8TB33 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.52■□□□□ 0.55
LINC01560Q8TB33 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC01560Q8TB33 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 AC068338.2-201ENST00000563278 1430 ntBASIC18.51■□□□□ 0.55
LINC01560Q8TB33 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 SLC7A5P1-201ENST00000568957 537 ntBASIC18.51■□□□□ 0.55
LINC01560Q8TB33 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC01560Q8TB33 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 CYP2T1P-201ENST00000432607 1285 ntBASIC18.5■□□□□ 0.55
LINC01560Q8TB33 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 AC137767.1-201ENST00000602918 1920 ntBASIC18.5■□□□□ 0.55
LINC01560Q8TB33 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.5■□□□□ 0.55
LINC01560Q8TB33 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC01560Q8TB33 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 FAM201B-201ENST00000458407 597 ntBASIC18.48■□□□□ 0.55
LINC01560Q8TB33 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 AC008175.2-201ENST00000612840 297 ntBASIC18.48■□□□□ 0.55
LINC01560Q8TB33 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 AC087742.1-201ENST00000575880 1738 ntBASIC18.48■□□□□ 0.55
LINC01560Q8TB33 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 MKRN4P-201ENST00000444706 1521 ntBASIC18.48■□□□□ 0.55
LINC01560Q8TB33 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC01560Q8TB33 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 AC120498.10-201ENST00000621827 505 ntBASIC18.47■□□□□ 0.55
LINC01560Q8TB33 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
LINC01560Q8TB33 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LINC01560Q8TB33 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms