Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 AC097658.1-201ENST00000475555 843 ntBASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 AC091874.3-201ENST00000512672 1195 ntBASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
LINC00116Q8NCU8 AC092068.2-201ENST00000590491 1708 ntBASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 AC006058.3-201ENST00000606217 1069 ntBASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.33■■□□□ 1.97
LINC00116Q8NCU8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 AL158047.1-201ENST00000445918 881 ntBASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
LINC00116Q8NCU8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 AC128676.1-201ENST00000454392 318 ntBASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 AL034346.1-201ENST00000568244 1277 ntBASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 AP006294.2-201ENST00000641667 209 ntBASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
LINC00116Q8NCU8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 AC010980.2-201ENST00000587099 1412 ntBASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
LINC00116Q8NCU8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
LINC00116Q8NCU8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 AC142381.4-202ENST00000563973 229 ntBASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
LINC00116Q8NCU8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
LINC00116Q8NCU8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms