Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC44A5Q8NCS7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC25.21■■□□□ 1.63
SLC44A5Q8NCS7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.21■■□□□ 1.63
SLC44A5Q8NCS7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SLC44A5Q8NCS7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SLC44A5Q8NCS7 AC026471.6-201ENST00000622954 1905 ntBASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 AC026185.1-201ENST00000445748 174 ntBASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 GXYLT1P5-201ENST00000614548 1189 ntBASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.2■■□□□ 1.62
SLC44A5Q8NCS7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 HLA-L-209ENST00000420110 1011 ntBASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC44A5Q8NCS7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 MYCNOS-205ENST00000641950 531 ntBASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SLC44A5Q8NCS7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.17■■□□□ 1.62
SLC44A5Q8NCS7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 MAP2K4P1-201ENST00000438453 1195 ntBASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 PPP1R14BP3-201ENST00000509033 445 ntBASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 DUX4L16-201ENST00000555130 1264 ntBASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SLC44A5Q8NCS7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 AC092053.2-201ENST00000640557 1818 ntBASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 AC053503.5-201ENST00000601508 636 ntBASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SLC44A5Q8NCS7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SLC44A5Q8NCS7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms