Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 BX005040.4-201ENST00000637145 1518 ntBASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.7■□□□□ 0.42
C11orf42Q8N5U0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C11orf42Q8N5U0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C11orf42Q8N5U0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 TPRG1LP1-201ENST00000598702 760 ntBASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 AC092053.2-201ENST00000640557 1818 ntBASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C11orf42Q8N5U0 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 AP004607.7-201ENST00000527152 1677 ntBASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C11orf42Q8N5U0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms