Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.74■■□□□ 1.07
CHPFQ8IZ52 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CHPFQ8IZ52 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 AC010141.2-201ENST00000452426 721 ntBASIC21.72■■□□□ 1.07
CHPFQ8IZ52 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 AC138907.5-202ENST00000569484 235 ntBASIC21.72■■□□□ 1.07
CHPFQ8IZ52 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.72■■□□□ 1.07
CHPFQ8IZ52 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 AC005181.1-201ENST00000604782 1256 ntBASIC21.71■■□□□ 1.07
CHPFQ8IZ52 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 C9orf163-202ENST00000624034 2573 ntBASIC21.71■■□□□ 1.07
CHPFQ8IZ52 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHPFQ8IZ52 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CHPFQ8IZ52 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 AL121832.2-201ENST00000610979 668 ntBASIC21.7■■□□□ 1.06
CHPFQ8IZ52 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.7■■□□□ 1.06
CHPFQ8IZ52 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 AC083906.2-201ENST00000511578 360 ntBASIC21.69■■□□□ 1.06
CHPFQ8IZ52 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 AL050303.2-201ENST00000619798 666 ntBASIC21.69■■□□□ 1.06
CHPFQ8IZ52 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 AP006587.3-201ENST00000525742 1516 ntBASIC21.69■■□□□ 1.06
CHPFQ8IZ52 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.69■■□□□ 1.06
CHPFQ8IZ52 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 KRT18P20-201ENST00000548986 1279 ntBASIC21.68■■□□□ 1.06
CHPFQ8IZ52 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CHPFQ8IZ52 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.67■■□□□ 1.06
CHPFQ8IZ52 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHPFQ8IZ52 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.66■■□□□ 1.06
CHPFQ8IZ52 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms